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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
ChIP-seq
1
Hi-C
1
RRBS
1
WGBS
Assay category
2
DNA methylation
1
3D chromatin structure
1
DNA binding
Target of assay
1
transcription factor
Date released
2
August, 2017
1
December, 2018
1
November, 2017
Available data
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
4
Homo sapiens
Biosample type
2
cell line
2
tissue
Organ
70
pancreas
69
epithelium
4
liver
2
adipose tissue
2
connective tissue
2
musculature of body
1
brain
1
embryo
Project
4
AMP
Genome assembly (visualization)
1
hg19
Lab
4
AMP-T2D consortium
organ_slims!
eye
files.file_type!
bam
BIOSAMPLE
ASSAY
4 results
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Clear Filters
ChIP-seq
Hi-C
RRBS
WGBS
cell line
HepG2
1
1
tissue
liver
1
1
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