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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
393
ChIP-seq
Assay category
393
DNA binding
Target of assay
244
transcription factor
75
histone
75
histone modification
71
control
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
617
February, 2021
393
November, 2017
288
August, 2017
283
May, 2020
277
May, 2021
250
October, 2019
211
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
88
November, 2018
82
July, 2019
79
April, 2019
76
February, 2023
76
October, 2018
73
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
16
March, 2020
11
September, 2017
7
August, 2020
6
November, 2020
5
December, 2019
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
393
Homo sapiens
Biosample type
315
cell line
69
tissue
9
primary cell
Organ
315
liver
78
brain
6
epithelium
6
vasculature
3
blood vessel
Project
393
AMP
Genome assembly (visualization)
280
GRCh38
280
hg19
Lab
393
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
eye
BIOSAMPLE
ASSAY
393 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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