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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1570
ChIP-seq
1419
total RNA-seq
498
ATAC-seq
369
single cell RNA-seq
203
DNase-seq
87
RNA microarray
84
snATAC-seq
66
WGBS
53
pCHi-C
34
Hi-C
18
small RNA-seq
14
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
84
February, 2021
2
December, 2019
1
August, 2021
1
February, 2023
Available data
84
txt
2
tsv
Organism
86
Homo sapiens
Biosample type
87
tissue
1
cell line
Organ
84
bone element
2
epithelium
2
kidney
1
adipose tissue
1
connective tissue
1
pancreas
Project
88
AMP
Lab
88
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
2
audit script error
organ_slims!
eye
month_released!
August, 2017
BIOSAMPLE
ASSAY
88 results
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RNA microarray
CRISPR genome editing followed by sgRNA sequencing
tissue
bone element
84
kidney interstitium
1
renal glomerulus
1
subcutaneous adipose tissue
1
cell line
EndoC_BH1
1
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