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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
1
Hi-C
Assay category
8
Transcription
1
3D chromatin structure
Date released
6
February, 2021
1
March, 2019
1
November, 2018
1
September, 2018
Available data
3221
bam
2999
bigWig
1784
bed narrowPeak
1431
tsv
1308
fastq
1036
bigBed narrowPeak
398
tagAlign
318
bed broadPeak
281
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
9
Homo sapiens
Biosample type
7
tissue
2
primary cell
Organ
5
kidney
1
liver
1
pancreas
Project
9
AMP
Genome assembly (visualization)
1
hg19
Lab
8
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
5
audit script error
organ_slims!
eye
month_released!
July, 2018
BIOSAMPLE
ASSAY
9 results
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single cell RNA-seq
Hi-C
tissue
kidney
5
islet of Langerhans
1
liver
1
primary cell
pancreatic cell
2
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