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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
total RNA-seq
37
single cell RNA-seq
Assay category
166
Transcription
126
DNA binding
110
DNA accessibility
52
DNA methylation
8
3D chromatin structure
Date released
37
February, 2023
33
April, 2018
July, 2018
26
February, 2021
26
September, 2018
16
September, 2020
6
May, 2021
5
December, 2019
5
July, 2019
3
August, 2018
3
October, 2019
2
March, 2020
2
October, 2018
1
June, 2018
1
November, 2019
Available data
114
fastq
113
bam
113
bigWig
113
tsv
Organism
166
Homo sapiens
Biosample type
130
primary cell
34
cell line
2
in vitro differentiated cells
Organ
479
connective tissue
401
adipose tissue
322
pancreas
193
liver
168
epithelium
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
111
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
113
GRCh38
113
hg19
Lab
113
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
34
inconsistent ontology term
organ_slims!
eye
month_released!
July, 2018
BIOSAMPLE
ASSAY
166 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
5
pancreatic beta cell
21
3
pancreatic acinar cell
4
7
pancreatic ductal cell
4
7
pancreatic delta cell
7
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cell line
EndoC_BH1
33
glomerular visceral epithelial cell
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
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