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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
96
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
75
histone
75
histone modification
38
narrow histone mark
36
broad histone mark
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
343
May, 2021
165
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
103
August, 2017
80
November, 2017
79
August, 2021
73
September, 2018
65
October, 2019
59
September, 2020
48
July, 2018
48
June, 2019
43
April, 2018
39
February, 2018
35
December, 2017
30
July, 2019
24
March, 2020
20
November, 2019
12
November, 2020
9
January, 2019
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
November, 2018
5
September, 2017
4
August, 2018
4
May, 2019
4
October, 2022
3
December, 2018
3
June, 2018
2
October, 2018
Available data
88
bam
88
fastq
70
bigWig
57
bed narrowPeak
26
tagAlign
18
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
103
Homo sapiens
Biosample type
tissue
57
primary cell
46
in vitro differentiated cells
Organ
46
connective tissue
41
pancreas
29
epithelium
Project
103
AMP
Genome assembly (visualization)
72
hg19
68
GRCh38
Lab
103
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
organ_slims!
eye
biosample_type!
tissue
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
skeletal muscle myoblast
13
2
1
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
in vitro differentiated cells
adipocyte
45
1
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