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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
2
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
11
Transcription
1
3D chromatin structure
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
51
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
30
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
7
tsv
5
bam
5
bigWig
1
hic
Organism
8
Homo sapiens
Biosample type
6
primary cell
tissue
2
cell line
2
in vitro differentiated cells
2
stem cell
Organ
5
epithelium
5
liver
Project
7
AMP
4
community
1
ITG
Genome assembly (visualization)
6
GRCh38
5
hg19
Lab
7
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
2
audit script error
2
inconsistent ontology term
organ_slims!
eye
biosample_type!
tissue
BIOSAMPLE
ASSAY
12 results
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Clear Filters
total RNA-seq
single cell RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
primary cell
hepatocyte
5
chondrocytes
1
cell line
EndoC-BH1
1
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
stem cell
SB Ad3.1
1
1
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