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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
12
total RNA-seq
Assay category
91
DNA binding
12
Transcription
Target of assay
73
histone
73
histone modification
42
broad histone mark
31
narrow histone mark
15
control
3
RNA binding protein
3
transcription factor
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
18
July, 2019
16
October, 2017
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
78
bam
66
bigWig
66
tagAlign
64
bed narrowPeak
63
bigBed narrowPeak
12
bed broadPeak
12
tsv
9
fastq
6
bigBed broadPeak
Organism
103
Homo sapiens
Biosample type
94
tissue
9
primary cell
Organ
316
liver
103
brain
9
vasculature
6
blood vessel
6
epithelium
3
heart
3
limb
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
eye
1
nerve
1
pancreas
1
spinal cord
Project
103
AMP
Genome assembly (visualization)
63
GRCh38
15
hg19
Lab
103
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
eye
BIOSAMPLE
ASSAY
103 results
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ChIP-seq
total RNA-seq
tissue
layer of hippocampus
22
caudate nucleus
15
1
substantia nigra
15
1
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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