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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
434
ChIP-seq
183
DNase-seq
Assay category
434
DNA binding
183
DNA accessibility
Target of assay
247
transcription factor
106
histone
106
histone modification
78
control
66
recombinant protein
58
broad histone mark
48
narrow histone mark
40
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
289
October, 2019
211
June, 2019
200
May, 2022
174
February, 2023
168
July, 2018
120
May, 2019
107
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
603
bam
538
bigWig
517
bed narrowPeak
516
bigBed narrowPeak
324
fastq
253
bed broadPeak
247
bigBed broadPeak
183
bed bed3+
78
tagAlign
3
tar
Organism
617
Homo sapiens
Biosample type
315
cell line
242
tissue
60
primary cell
Organ
317
liver
121
brain
81
kidney
43
musculature of body
35
heart
32
limb
26
epithelium
18
connective tissue
18
ureter
13
vasculature
8
blood vessel
eye
4
pancreas
2
artery
1
adipose tissue
Project
617
AMP
Genome assembly (visualization)
484
GRCh38
462
hg19
Lab
617
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
eye
ovary
BIOSAMPLE
ASSAY
617 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
heart
18
muscle of arm
17
caudate nucleus
15
1
substantia nigra
15
+ See 37 more…
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
+ See 16 more…
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