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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
16
snATAC-seq
Assay category
73
DNA binding
16
DNA accessibility
Target of assay
42
transcription factor
31
histone
31
histone modification
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
254
October, 2019
204
June, 2019
200
May, 2022
174
February, 2023
168
July, 2018
104
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
73
bam
73
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
10
bed bed3+
Organism
89
Homo sapiens
Biosample type
44
tissue
35
in vitro differentiated cells
8
primary cell
2
stem cell
Organ
50
liver
16
epithelium
9
embryo
8
blood
8
bodily fluid
8
pancreas
Project
73
AMP
16
T1D
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
organ_slims!
eye
target.investigated_as!
control
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
snATAC-seq
tissue
liver
29
right lobe of liver
7
islet of Langerhans
4
pancreas
4
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
primary cell
peripheral blood mononuclear cell
8
stem cell
hESC
2
See all biosamples
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