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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
9
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
3
December, 2018
3
November, 2018
1
March, 2020
1
October, 2017
Available data
13
bam
13
bigWig
13
fastq
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
14
Homo sapiens
Biosample type
14
tissue
Organ
893
pancreas
681
liver
649
connective tissue
494
epithelium
467
adipose tissue
373
heart
342
kidney
255
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
63
blood
63
bodily fluid
eye
32
nerve
30
embryo
20
lung
20
vein
18
ureter
16
skeleton
14
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
14
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
14
AMP-T2D consortium
organ_slims!
eye
target.investigated_as!
control
other context
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
9
2
1
1
1
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