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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
ChIP-seq
Assay category
202
DNA binding
Target of assay
202
histone
202
histone modification
123
narrow histone mark
79
broad histone mark
33
control
3
RNA binding protein
3
transcription factor
Date released
92
October, 2019
73
November, 2017
25
May, 2019
12
October, 2017
Available data
181
bam
178
bigWig
177
bed narrowPeak
101
bigBed narrowPeak
99
tagAlign
14
bed broadPeak
10
fastq
5
bigBed broadPeak
1
tagAlign bed3+
Organism
202
Homo sapiens
Biosample type
184
tissue
18
primary cell
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
202
AMP
Genome assembly (visualization)
178
GRCh38
129
hg19
Lab
202
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
eye
BIOSAMPLE
ASSAY
202 results
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ChIP-seq
tissue
layer of hippocampus
20
brain
17
angular gyrus
14
substantia nigra
14
caudate nucleus
13
+ See 63 more…
primary cell
endothelial cell of umbilical vein
15
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
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