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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
Assay category
117
DNA binding
Target of assay
338
transcription factor
118
histone modification
117
histone
110
control
82
recombinant protein
66
narrow histone mark
58
RNA binding protein
51
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
32
August, 2017
27
May, 2020
20
October, 2019
17
December, 2017
15
November, 2017
6
August, 2021
Available data
94
bam
94
bigWig
90
bed narrowPeak
58
tagAlign
45
bigBed narrowPeak
44
fastq
16
bed broadPeak
16
bigBed broadPeak
3
bed bed3+
Organism
117
Homo sapiens
Biosample type
69
tissue
18
cell line
18
primary cell
12
in vitro differentiated cells
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
117
AMP
Genome assembly (visualization)
94
hg19
79
GRCh38
Lab
114
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
organ_slims!
eye
BIOSAMPLE
ASSAY
117 results
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Clear Filters
ChIP-seq
tissue
liver
64
right lobe of liver
5
cell line
HepG2
18
primary cell
endothelial cell of umbilical vein
15
hepatocyte
3
in vitro differentiated cells
hepatocyte
12
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