Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
4
ChIP-seq
2
total RNA-seq
1
Hi-C
Assay category
10
DNA accessibility
4
DNA binding
2
Transcription
1
3D chromatin structure
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
7
August, 2020
5
March, 2020
3
September, 2020
1
March, 2023
1
May, 2021
Available data
16
bigWig
10
fastq
6
bam
4
bed narrowPeak
2
tsv
1
hic
Organism
17
Homo sapiens
Biosample type
11
primary cell
4
cell line
2
tissue
Organ
16
pancreas
14
epithelium
Project
AMP
10
HPAP
6
T1D
1
ITG
Genome assembly (visualization)
17
GRCh38
9
hg19
Lab
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
6
AMP-T2D consortium
1
ITG
Audit category:
4
inconsistent ontology term
organ_slims!
gonad
award.project!
AMP
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
chondrocytes
1
cell line
EndoC_BH1
2
2
tissue
islet of Langerhans
2
Download