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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
27
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
narrow histone mark
Date released
34
October, 2019
1
February, 2020
Available data
34
bam
23
bigWig
19
bed narrowPeak
18
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
35
Homo sapiens
Biosample type
35
tissue
Organ
873
pancreas
731
liver
651
connective tissue
479
adipose tissue
475
epithelium
353
heart
339
kidney
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
Lab
35
AMP-T2D consortium
organ_slims!
gonad
lab.title!
Xin Sun, UCSD
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
27
5
2
1
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