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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
157
ChIP-seq
Assay category
157
DNA binding
Target of assay
94
histone
94
histone modification
63
control
62
broad histone mark
32
narrow histone mark
Date released
60
November, 2017
46
August, 2017
23
May, 2020
9
August, 2021
9
October, 2019
8
October, 2017
1
February, 2021
1
May, 2021
Available data
364
bam
349
fastq
157
tagAlign
156
txt
153
zippedFastqFolder
141
bed narrowPeak
104
bigWig
100
tsv
76
bigBed narrowPeak
64
xls
21
bed broadPeak
20
bed bed3+
20
bigBed broadPeak
11
bed bedMethyl
11
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
157
Homo sapiens
Biosample type
132
tissue
23
in vitro differentiated cells
1
cell line
1
primary cell
Organ
75
brain
44
liver
21
connective tissue
7
adipose tissue
4
pancreas
2
artery
2
blood vessel
2
epithelium
heart
2
musculature of body
2
vasculature
Project
157
AMP
Genome assembly (visualization)
236
GRCh38
hg19
Lab
157
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
heart
assembly!
hg19
BIOSAMPLE
ASSAY
157 results
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ChIP-seq
tissue
liver
43
caudate nucleus
14
layer of hippocampus
14
substantia nigra
14
cingulate gyrus
12
+ See 14 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
8
pancreatic PP cell
1
cell line
iPSC derived cell line
1
primary cell
hepatocyte
1
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