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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
14
ATAC-seq
2
pCHi-C
1
ChIP-seq
Assay category
493
Transcription
14
DNA accessibility
1
DNA binding
Target of assay
1
transcription factor
Date released
510
February, 2021
313
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
209
October, 2019
164
July, 2018
157
June, 2019
82
May, 2019
77
December, 2017
74
July, 2019
72
September, 2018
71
November, 2018
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
28
March, 2020
26
January, 2019
18
April, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
505
bam
495
bigWig
493
tsv
11
bed narrowPeak
4
bed bedgraph
2
bed bed3
2
bed bed3+
1
tagAlign
Organism
510
Homo sapiens
Biosample type
452
tissue
29
cell line
26
in vitro differentiated cells
3
primary cell
Organ
455
connective tissue
386
adipose tissue
66
bone element
64
artery
64
blood vessel
heart
64
vasculature
26
epithelium
26
pancreas
8
skeleton
6
limb
2
liver
Project
510
AMP
Genome assembly (visualization)
510
hg19
504
GRCh38
Lab
510
AMP-T2D consortium
Audit category:
44
inconsistent ontology term
1
inconsistent replicate
organ_slims!
heart
BIOSAMPLE
ASSAY
510 results
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Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
ChIP-seq
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
distal epiphysis
1
+ See 7 more…
cell line
EndoC_BH1
26
HepG2
1
1
iPSC derived cell line
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
primary cell
osteoblast
1
1
1
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