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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
1
ATAC-seq
1
total RNA-seq
Assay category
23
DNA binding
3
DNA accessibility
3
Transcription
Target of assay
18
histone
18
histone modification
14
broad histone mark
5
control
4
narrow histone mark
Date released
26
October, 2019
2
August, 2021
1
February, 2020
Available data
26
bam
21
bed narrowPeak
21
bigWig
20
bigBed narrowPeak
3
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
29
Homo sapiens
Biosample type
29
tissue
Organ
891
pancreas
775
liver
662
connective tissue
503
epithelium
477
adipose tissue
heart
352
kidney
280
brain
235
vasculature
229
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
69
blood
69
bodily fluid
57
eye
43
nerve
36
embryo
24
spleen
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
29
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
29
AMP-T2D consortium
organ_slims!
heart
audit.NOT_COMPLIANT.category!
missing controlled_by
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
DNase-seq
single cell RNA-seq
ATAC-seq
total RNA-seq
tissue
tibial artery
23
2
1
1
pulmonary artery
2
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