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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
70
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
601
February, 2021
312
November, 2017
206
August, 2021
191
August, 2017
168
May, 2021
167
May, 2020
136
June, 2019
120
July, 2018
102
October, 2019
87
November, 2018
81
February, 2023
66
May, 2022
63
December, 2017
57
July, 2019
53
March, 2020
51
November, 2019
47
September, 2023
44
October, 2018
35
December, 2018
23
February, 2018
23
January, 2019
22
February, 2020
19
April, 2020
18
May, 2019
15
May, 2023
11
October, 2017
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
April, 2019
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
87
bam
87
fastq
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
87
Homo sapiens
Biosample type
61
cell line
26
tissue
primary cell
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
87
AMP
Genome assembly (visualization)
79
GRCh38
71
hg19
Lab
87
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
heart
biosample_type!
primary cell
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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