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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
DNase-seq
2
ChIP-seq
Assay category
165
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
157
June, 2019
9
October, 2019
1
November, 2020
Available data
3181
bam
2945
bigWig
1626
bed narrowPeak
1432
tsv
fastq
948
bigBed narrowPeak
392
tagAlign
292
bed broadPeak
255
bigBed broadPeak
243
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
20
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
167
Homo sapiens
Biosample type
140
tissue
26
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
30
brain
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
liver
2
nerve
1
adipose tissue
Project
167
AMP
Genome assembly (visualization)
165
GRCh38
147
hg19
Lab
167
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
heart
files.file_type!
fastq
BIOSAMPLE
ASSAY
167 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
renal cortex interstitium
11
+ See 30 more…
primary cell
endothelial cell of umbilical vein
2
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
cell line
Panc1
1
See all biosamples
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