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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
11
WGBS
1
Hi-C
Assay category
28
DNA methylation
1
3D chromatin structure
Date released
15
July, 2019
7
November, 2018
6
August, 2017
1
March, 2019
Available data
3181
bam
2945
bigWig
1626
bed narrowPeak
1432
tsv
1358
fastq
948
bigBed narrowPeak
392
tagAlign
292
bed broadPeak
255
bigBed broadPeak
243
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
20
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
29
Homo sapiens
Biosample type
19
tissue
9
primary cell
1
cell line
Organ
heart
7
pancreas
6
epithelium
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
29
AMP
Genome assembly (visualization)
18
hg19
11
GRCh38
Lab
28
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
29 results
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Clear Filters
RRBS
WGBS
Hi-C
tissue
pancreas
1
2
adipose tissue
2
body of pancreas
2
islet of Langerhans
1
1
skeletal muscle tissue
2
+ See 7 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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