Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
5
single cell RNA-seq
4
total RNA-seq
1
MPRA
1
snATAC-seq
Assay category
9
Transcription
1
DNA accessibility
Date released
89
February, 2021
4
February, 2023
1
May, 2022
1
October, 2022
Available data
2976
bam
2675
bigWig
1392
bed narrowPeak
1320
tsv
1163
fastq
948
bigBed narrowPeak
308
tagAlign
290
bed broadPeak
255
bigBed broadPeak
239
bed bed3+
95
txt
28
bed bedMethyl
28
bigBed bedMethyl
15
bedpe bed3+
13
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
Organism
94
Homo sapiens
Biosample type
94
tissue
1
cell line
Organ
88
bone element
5
kidney
4
skeleton
1
musculature of body
Project
95
AMP
Genome assembly (visualization)
1
hg19
Lab
95
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
84
inconsistent ontology term
6
audit script error
organ_slims!
heart
BIOSAMPLE
ASSAY
95 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
single cell RNA-seq
total RNA-seq
MPRA
snATAC-seq
tissue
bone element
84
kidney
5
acetabular part of hip bone
1
ilium
1
ischium
1
+ See 2 more…
cell line
MIN6
1
See all biosamples
Download