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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
157
DNase-seq
49
ChIP-seq
Assay category
157
DNA accessibility
49
DNA binding
Target of assay
35
histone
35
histone modification
18
broad histone mark
17
narrow histone mark
10
control
4
RNA binding protein
4
transcription factor
Date released
604
February, 2021
411
August, 2017
406
November, 2017
396
May, 2021
341
May, 2020
306
October, 2019
227
August, 2021
183
June, 2019
168
July, 2018
99
May, 2019
94
December, 2017
93
February, 2023
88
November, 2018
83
July, 2019
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
206
bam
195
bed narrowPeak
195
bigBed narrowPeak
195
bigWig
157
bed bed3+
157
bed broadPeak
157
bigBed broadPeak
Organism
206
Homo sapiens
Biosample type
159
tissue
47
primary cell
Organ
104
kidney
heart
43
musculature of body
32
limb
30
brain
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
206
AMP
Genome assembly (visualization)
195
GRCh38
175
hg19
Lab
206
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
organ_slims!
heart
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
206 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
kidney
13
23
muscle of arm
17
muscle of leg
13
brain
12
renal cortex interstitium
11
+ See 28 more…
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
+ See 16 more…
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