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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
131
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
111
histone
111
histone modification
68
broad histone mark
43
narrow histone mark
17
control
3
RNA binding protein
3
transcription factor
Date released
649
February, 2021
411
August, 2017
406
November, 2017
396
May, 2021
341
May, 2020
306
October, 2019
227
August, 2021
200
May, 2022
183
June, 2019
169
February, 2023
168
July, 2018
99
May, 2019
94
December, 2017
88
November, 2018
83
July, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
171
bam
154
bigWig
128
bed narrowPeak
96
bigBed narrowPeak
73
fastq
26
tsv
1
csv
Organism
172
Homo sapiens
Biosample type
94
tissue
78
primary cell
Organ
74
pancreas
66
epithelium
50
blood vessel
50
vasculature
28
brain
heart
7
limb
7
musculature of body
5
artery
5
kidney
Project
172
AMP
Genome assembly (visualization)
154
hg19
153
GRCh38
Lab
172
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
32
missing controlled_by
organ_slims!
heart
BIOSAMPLE
ASSAY
172 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 3 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
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