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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
ChIP-seq
20
total RNA-seq
16
ATAC-seq
4
DNase-seq
4
pCHi-C
Assay category
197
DNA binding
20
DNA accessibility
20
Transcription
Target of assay
169
histone
169
histone modification
129
narrow histone mark
40
broad histone mark
28
control
Date released
545
February, 2021
284
August, 2017
234
October, 2019
193
May, 2020
137
August, 2021
136
June, 2019
120
July, 2018
94
May, 2019
82
November, 2017
74
October, 2018
66
May, 2022
59
February, 2023
57
July, 2019
48
December, 2017
47
September, 2023
40
November, 2019
38
May, 2021
33
March, 2020
26
November, 2018
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
186
bam
159
bigWig
152
bed narrowPeak
53
bigBed narrowPeak
49
tagAlign
7
fastq
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
tagAlign bed3+
Organism
241
Homo sapiens
Biosample type
241
tissue
53
cell line
34
primary cell
8
in vitro differentiated cells
Organ
86
brain
69
limb
42
nerve
26
artery
26
blood vessel
26
vasculature
21
eye
heart
7
spleen
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
241
AMP
Genome assembly (visualization)
161
hg19
160
GRCh38
Lab
241
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
241 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
35
4
1
2
tibial artery
23
1
2
spleen
7
brain
5
1
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