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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
224
DNA binding
29
DNA accessibility
28
Transcription
3
3D chromatin structure
Date released
153
June, 2019
100
May, 2020
82
August, 2021
57
February, 2023
42
May, 2022
41
February, 2021
29
October, 2019
18
May, 2021
11
May, 2023
10
April, 2020
8
January, 2021
7
November, 2018
6
August, 2017
6
November, 2019
4
July, 2019
3
January, 2018
3
October, 2017
2
November, 2020
Available data
14
bam
14
bed narrowPeak
13
bigWig
11
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
1
tar
Organism
29
Homo sapiens
Biosample type
17
tissue
7
primary cell
4
in vitro differentiated cells
1
cell line
Organ
7
epithelium
6
blood vessel
6
limb
6
vasculature
pancreas
3
artery
3
connective tissue
3
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
29
AMP
Genome assembly (visualization)
17
hg19
13
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
heart
pancreas
BIOSAMPLE
ASSAY
29 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
10
tibial artery
1
2
tibial nerve
1
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
glomerular visceral epithelial cell
1
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