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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
WGBS
19
RRBS
1
DNAme array
Assay category
1736
DNA binding
1575
Transcription
658
DNA accessibility
40
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
17
July, 2019
15
August, 2017
7
November, 2018
1
May, 2021
Available data
28
bed bedMethyl
28
bigBed bedMethyl
15
fastq
12
bam
11
bigWig
Organism
40
Homo sapiens
Biosample type
29
tissue
10
primary cell
1
cell line
Organ
heart
7
connective tissue
7
liver
6
adipose tissue
6
epithelium
6
musculature of body
6
pancreas
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
40
AMP
Genome assembly (visualization)
17
hg19
11
GRCh38
Lab
Klaus Kaestner, Upenn
40
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
heart
lymph node
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
40 results
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WGBS
RRBS
DNAme array
tissue
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 9 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 5 more…
cell line
HepG2
1
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