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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
46
histone
46
histone modification
narrow histone mark
21
broad histone mark
17
transcription factor
6
chromatin remodeller
2
RNA binding protein
1
recombinant protein
Date released
17
September, 2018
9
August, 2017
9
November, 2017
3
November, 2018
Available data
38
bam
38
fastq
37
bigWig
28
bed narrowPeak
11
bigBed narrowPeak
Organism
38
Homo sapiens
Biosample type
tissue
21
primary cell
12
cell line
5
in vitro differentiated cells
Organ
21
pancreas
12
liver
10
epithelium
5
connective tissue
Project
38
AMP
Genome assembly (visualization)
37
hg19
30
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
38
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
organ_slims!
heart
target.investigated_as!
narrow histone mark
biosample_type!
tissue
BIOSAMPLE
ASSAY
38 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
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