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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
1
ATAC-seq
1
total RNA-seq
Assay category
19
DNA binding
3
DNA accessibility
3
Transcription
Target of assay
18
histone
18
histone modification
14
broad histone mark
5
control
narrow histone mark
Date released
22
October, 2019
2
August, 2021
1
February, 2020
Available data
22
bam
17
bed narrowPeak
17
bigWig
16
bigBed narrowPeak
3
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
563
connective tissue
450
pancreas
436
adipose tissue
heart
339
kidney
285
liver
246
epithelium
206
vasculature
203
blood vessel
159
bone element
152
brain
135
artery
107
limb
81
musculature of body
58
eye
35
nerve
20
lung
18
ureter
16
skeleton
16
vein
10
embryo
9
blood
9
bodily fluid
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
25
AMP-T2D consortium
organ_slims!
heart
target.investigated_as!
narrow histone mark
files.file_type!
fastq
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
DNase-seq
single cell RNA-seq
ATAC-seq
total RNA-seq
tissue
tibial artery
19
2
1
1
pulmonary artery
2
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