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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
684
ChIP-seq
Assay category
684
DNA binding
Target of assay
685
histone modification
684
histone
488
transcription factor
361
narrow histone mark
322
broad histone mark
290
control
94
RNA binding protein
89
recombinant protein
35
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
170
October, 2019
160
August, 2017
85
November, 2017
76
May, 2019
31
December, 2017
30
October, 2018
27
May, 2020
22
May, 2021
18
April, 2019
17
August, 2021
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
543
bigWig
539
bed narrowPeak
522
bam
290
bigBed narrowPeak
223
tagAlign
156
fastq
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
678
Homo sapiens
Biosample type
532
tissue
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
99
liver
93
pancreas
70
connective tissue
heart
54
blood vessel
54
vasculature
49
limb
32
adipose tissue
27
epithelium
25
musculature of body
24
nerve
20
artery
20
kidney
12
embryo
6
spleen
4
gonad
4
ovary
2
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
680
AMP
4
T1D
Genome assembly (visualization)
511
GRCh38
493
hg19
Lab
661
AMP-T2D consortium
20
Kyle Gaulton, UCSD
3
Bing Ren, UCSD
Audit category:
16
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
26
inconsistent control read length
1
inconsistent assembly
organ_slims!
heart
biosample_type!
primary cell
BIOSAMPLE
ASSAY
684 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
subcutaneous abdominal adipose tissue
31
tibial nerve
24
kidney
20
+ See 93 more…
in vitro differentiated cells
adipocyte
37
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
+ See 7 more…
cell line
HepG2
18
EndoC_BH1
12
Panc1
7
GM12878
1
stem cell
hESC
2
See all biosamples
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