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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
pCHi-C
9
total RNA-seq
8
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
9
Transcription
8
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
593
February, 2021
343
August, 2017
340
May, 2020
276
October, 2019
246
May, 2021
233
August, 2021
218
June, 2019
200
May, 2022
183
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
48
December, 2017
47
September, 2023
40
May, 2024
40
November, 2019
39
March, 2020
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
7
August, 2020
7
December, 2018
7
January, 2019
5
March, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
January, 2018
1
August, 2022
1
March, 2023
Available data
26
tsv
11
bigWig
9
bam
8
bedpe bed3+
8
hic
2
bed narrowPeak
Organism
39
Homo sapiens
Biosample type
38
tissue
11
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
9
pancreas
7
heart
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
epithelium
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
35
AMP
4
T1D
Genome assembly (visualization)
19
hg19
9
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
intestine
BIOSAMPLE
ASSAY
39 results
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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
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primary cell
endothelial cell of umbilical vein
1
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