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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
270
ChIP-seq
167
DNase-seq
2
FAIRE-seq
1
ATAC-seq
Assay category
270
DNA binding
170
DNA accessibility
Target of assay
261
histone
261
histone modification
169
broad histone mark
92
narrow histone mark
9
transcription factor
7
RNA binding protein
Date released
163
June, 2019
93
May, 2019
64
April, 2019
57
November, 2017
47
October, 2019
14
October, 2018
2
July, 2019
Available data
1907
bam
1772
bigWig
1074
tsv
984
bed narrowPeak
561
bigBed narrowPeak
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
440
Homo sapiens
Biosample type
440
tissue
66
primary cell
8
cell line
2
in vitro differentiated cells
Organ
108
brain
88
heart
87
kidney
84
limb
62
blood vessel
62
vasculature
38
musculature of body
26
nerve
25
artery
19
pancreas
18
ureter
3
eye
2
adipose tissue
2
connective tissue
Project
440
AMP
Genome assembly (visualization)
436
GRCh38
372
hg19
Lab
440
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
intestine
files.file_type!
fastq
BIOSAMPLE
ASSAY
440 results
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ChIP-seq
DNase-seq
FAIRE-seq
ATAC-seq
tissue
kidney
18
13
1
heart left ventricle
28
3
tibial nerve
24
2
heart
7
18
tibial artery
18
2
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