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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1017
total RNA-seq
907
ChIP-seq
240
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
23
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
178
DNA accessibility
Date released
163
June, 2019
9
November, 2018
4
October, 2019
2
August, 2017
Available data
177
bam
177
bed narrowPeak
177
bigBed narrowPeak
177
bigWig
176
bed bed3+
176
bed broadPeak
176
bigBed broadPeak
10
fastq
Organism
178
Homo sapiens
Biosample type
178
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
5
blood vessel
5
vasculature
4
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
178
AMP
Genome assembly (visualization)
177
GRCh38
161
hg19
Lab
178
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
intestine
lab.title!
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
178 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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