Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
ChIP-seq
8
total RNA-seq
4
DNase-seq
3
ATAC-seq
1
Hi-C
Assay category
147
DNA binding
8
Transcription
7
DNA accessibility
1
3D chromatin structure
Target of assay
147
histone
147
histone modification
108
narrow histone mark
39
broad histone mark
Date released
452
February, 2021
180
August, 2017
170
May, 2020
163
October, 2019
147
June, 2019
116
July, 2018
93
May, 2019
65
April, 2019
60
July, 2019
45
October, 2018
40
November, 2019
39
May, 2022
38
May, 2021
36
December, 2017
33
February, 2023
18
March, 2020
17
November, 2018
13
October, 2017
6
April, 2018
6
January, 2019
6
November, 2017
3
December, 2018
3
March, 2019
2
January, 2018
2
September, 2017
1
August, 2021
1
May, 2023
Available data
160
bigWig
159
bam
151
bed narrowPeak
47
bigBed narrowPeak
40
tagAlign
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
163
Homo sapiens
Biosample type
163
tissue
26
primary cell
20
cell line
8
in vitro differentiated cells
Organ
78
brain
52
limb
31
nerve
21
artery
21
blood vessel
21
vasculature
8
heart
6
liver
2
kidney
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
163
AMP
Genome assembly (visualization)
163
hg19
161
GRCh38
Lab
163
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
intestine
BIOSAMPLE
ASSAY
163 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
Hi-C
tissue
tibial nerve
24
4
2
1
tibial artery
18
2
1
heart
5
2
1
brain
5
1
liver
5
1
+ See 77 more…
See all biosamples
Download