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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
825
ChIP-seq
211
total RNA-seq
133
single cell RNA-seq
47
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
133
Transcription
Date released
48
July, 2018
44
April, 2018
22
September, 2020
12
February, 2021
3
August, 2018
3
June, 2018
1
November, 2018
September, 2018
Available data
211
tsv
133
fastq
106
bam
106
bigWig
52
zippedFastqFolder
13
txt
7
csv
Organism
133
Homo sapiens
Biosample type
127
primary cell
6
tissue
Organ
75
pancreas
66
epithelium
3
connective tissue
Project
99
AMP
34
HPAP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
99
AMP-T2D consortium
34
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
organ_slims!
intestine
month_released!
September, 2018
BIOSAMPLE
ASSAY
133 results
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single cell RNA-seq
primary cell
Langerhans cell
34
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic acinar cell
9
+ See 12 more…
tissue
islet of Langerhans
6
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