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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
single cell RNA-seq
57
ATAC-seq
42
total RNA-seq
41
WGBS
22
snATAC-seq
Assay category
116
Transcription
79
DNA accessibility
41
DNA methylation
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
42
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
153
zippedFastqFolder
65
fastq
38
bed narrowPeak
24
bam
bigWig
7
txt
1
bed bed3+
Organism
236
Homo sapiens
Biosample type
190
primary cell
46
tissue
Organ
120
pancreas
96
epithelium
20
liver
2
musculature of body
Project
190
HPAP
46
AMP
Genome assembly (visualization)
19
hg19
Lab
190
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
2
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
intestine
files.file_type!
bigWig
BIOSAMPLE
ASSAY
236 results
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Clear Filters
single cell RNA-seq
ATAC-seq
total RNA-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
73
21
pancreatic alpha cell
22
15
25
pancreatic beta cell
13
1
16
pancreatic acinar cell
4
tissue
islet of Langerhans
18
6
liver
20
skeletal muscle tissue
1
1
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