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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
pCHi-C
Assay category
3D chromatin structure
Date released
2
March, 2020
1
August, 2018
Available data
3075
bam
2865
bigWig
1666
bed narrowPeak
1442
tsv
1100
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
249
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
3
bedpe bed3+
3
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Organ
1
adipose tissue
1
connective tissue
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
3
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
intestine
epithelium
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
3 results
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pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
white fat cell
1
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