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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
WGBS
11
RRBS
8
Hi-C
6
ATAC-seq
1
FAIRE-seq
Assay category
Transcription
23
DNA methylation
8
3D chromatin structure
7
DNA accessibility
Date released
406
November, 2017
322
August, 2017
260
October, 2019
217
May, 2021
151
May, 2020
149
February, 2021
140
May, 2022
137
June, 2019
115
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
74
October, 2018
66
August, 2021
57
April, 2019
47
March, 2020
46
September, 2018
41
November, 2019
38
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
1
August, 2018
1
August, 2022
1
March, 2023
Available data
19
bed bedMethyl
19
bigBed bedMethyl
19
bigWig
16
bam
6
bed narrowPeak
4
bed bed3+
4
hdf5
1
bigBed narrowPeak
Organism
38
Homo sapiens
Biosample type
28
tissue
10
primary cell
Organ
14
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
38
AMP
Genome assembly (visualization)
21
hg19
14
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
assay_slims!
Transcription
BIOSAMPLE
ASSAY
38 results
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WGBS
RRBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
4
1
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
brain
1
+ See 12 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 5 more…
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