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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
WGBS
15
RRBS
Assay category
15
DNA methylation
Date released
11
July, 2019
4
August, 2017
Available data
3230
bam
2981
bigWig
1594
bed narrowPeak
1570
tsv
1341
fastq
938
bigBed narrowPeak
398
tagAlign
244
bed broadPeak
207
bigBed broadPeak
195
bed bed3+
112
zippedFastqFolder
99
txt
23
bedpe bed3+
22
hic
15
bed bedMethyl
15
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
15
Homo sapiens
Biosample type
8
tissue
7
primary cell
Organ
6
epithelium
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
15
AMP
Genome assembly (visualization)
15
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
assay_title!
WGBS
BIOSAMPLE
ASSAY
15 results
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RRBS
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
liver
1
+ See 2 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
See all biosamples
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