Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1274
total RNA-seq
1266
ChIP-seq
261
ATAC-seq
114
DNase-seq
100
single cell RNA-seq
26
Hi-C
17
small RNA-seq
15
RRBS
4
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Assay category
114
DNA accessibility
Date released
93
June, 2019
9
November, 2018
7
October, 2019
4
August, 2017
1
November, 2020
Available data
114
bam
114
bed narrowPeak
114
bigBed narrowPeak
114
bigWig
112
bed broadPeak
112
bigBed broadPeak
110
bed bed3+
12
fastq
Organism
114
Homo sapiens
Biosample type
94
tissue
18
primary cell
1
cell line
1
in vitro differentiated cells
Organ
kidney
36
limb
33
musculature of body
27
heart
22
brain
18
ureter
11
epithelium
10
vasculature
8
blood vessel
8
connective tissue
6
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
114
AMP
Genome assembly (visualization)
128
GRCh38
114
hg19
Lab
114
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
114 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
muscle of arm
17
heart
16
brain
14
muscle of leg
13
heart left ventricle
3
+ See 20 more…
primary cell
cardiac fibroblast
2
endothelial cell of umbilical vein
2
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 10 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download