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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
972
total RNA-seq
757
ChIP-seq
146
ATAC-seq
85
RNA microarray
83
DNase-seq
22
pCHi-C
22
snATAC-seq
19
WGBS
17
single cell RNA-seq
14
small RNA-seq
12
Hi-C
9
RRBS
4
MeRIP-seq
3
FAIRE-seq
Assay category
972
Transcription
Date released
444
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
37
May, 2021
26
May, 2022
24
July, 2019
22
February, 2020
20
October, 2019
19
November, 2019
13
February, 2023
7
March, 2020
6
April, 2018
1
August, 2021
1
May, 2023
Available data
915
tsv
894
bam
888
bigWig
103
fastq
10
txt
Organism
972
Homo sapiens
Biosample type
972
tissue
237
primary cell
135
in vitro differentiated cells
57
cell line
Organ
455
connective tissue
397
adipose tissue
289
pancreas
170
liver
62
bone element
kidney
19
eye
17
brain
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
4
skeleton
2
artery
2
epithelium
1
spinal cord
Project
965
AMP
7
T1D
Genome assembly (visualization)
889
GRCh38
889
hg19
Lab
939
AMP-T2D consortium
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
heart
BIOSAMPLE
ASSAY
972 results
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Clear Filters
total RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
liver
167
bone tissue
58
subcutaneous adipose tissue
7
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