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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
4
Transcription
2
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
699
February, 2021
291
May, 2020
234
May, 2021
205
February, 2023
200
May, 2022
168
July, 2018
146
August, 2021
115
August, 2017
109
June, 2019
97
July, 2019
63
October, 2019
59
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
8
January, 2018
8
October, 2017
7
August, 2020
7
December, 2019
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
1
May, 2023
Available data
6
bam
5
bigWig
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
16
Homo sapiens
Biosample type
6
cell line
6
primary cell
4
tissue
Organ
10
pancreas
6
connective tissue
6
epithelium
Project
16
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
6
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
organ_slims!
kidney
audit.ERROR.category!
inconsistent control
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
16 results
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Clear Filters
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
1
tissue
islet of Langerhans
4
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