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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
10
total RNA-seq
1
snATAC-seq
Assay category
10
Transcription
1
DNA accessibility
Date released
84
February, 2021
7
May, 2022
4
February, 2023
Available data
1809
bam
1641
bigWig
1064
tsv
791
bed narrowPeak
474
bigBed narrowPeak
377
fastq
238
tagAlign
145
bed broadPeak
137
bed bed3+
108
bigBed broadPeak
95
txt
24
bed bedMethyl
24
bigBed bedMethyl
10
bedpe bed3+
10
hic
5
bed bed3
1
bedpe
1
csv
1
tagAlign bed3+
Organism
95
Homo sapiens
Biosample type
95
tissue
3
in vitro differentiated cells
1
cell line
Organ
88
bone element
kidney
6
pancreas
4
skeleton
1
musculature of body
Project
95
AMP
Genome assembly (visualization)
1
hg19
Lab
89
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
1
audit script error
organ_slims!
kidney
BIOSAMPLE
ASSAY
95 results
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RNA microarray
total RNA-seq
snATAC-seq
tissue
bone element
84
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
skeletal muscle tissue
1
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