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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
RRBS
8
WGBS
Assay category
19
DNA methylation
Date released
19
July, 2019
Available data
3248
bam
2998
bigWig
1594
bed narrowPeak
1576
tsv
fastq
938
bigBed narrowPeak
398
tagAlign
244
bed broadPeak
207
bigBed broadPeak
195
bed bed3+
153
zippedFastqFolder
99
txt
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
19
Homo sapiens
Biosample type
13
tissue
6
primary cell
Organ
8
heart
6
epithelium
kidney
2
brain
2
musculature of body
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
19
AMP
Genome assembly (visualization)
11
hg19
8
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
files.file_type!
fastq
BIOSAMPLE
ASSAY
19 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 1 more…
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