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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
39
ChIP-seq
4
DNase-seq
Assay category
49
DNA accessibility
39
DNA binding
Target of assay
31
histone
31
histone modification
18
broad histone mark
13
narrow histone mark
8
transcription factor
1
RNA binding protein
Date released
35
February, 2023
21
October, 2019
12
February, 2021
8
December, 2017
6
February, 2018
3
May, 2019
2
June, 2019
1
July, 2019
Available data
138
bam
114
bigWig
88
bed narrowPeak
72
tsv
27
fastq
25
bigBed narrowPeak
7
bed bed3+
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Organism
88
Homo sapiens
Biosample type
62
tissue
14
in vitro differentiated cells
12
cell line
Organ
441
liver
214
pancreas
203
brain
191
heart
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
88
GRCh38
53
hg19
Lab
88
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
inconsistent control read length
organ_slims!
kidney
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
tibial artery
1
18
2
in vitro differentiated cells
pancreatic endoderm
12
Hepatic endoderm
2
cell line
smooth muscle cell of the coronary artery
8
4
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