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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
3
DNase-seq
Assay category
16
DNA binding
3
DNA accessibility
Target of assay
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
19
June, 2019
Available data
192
bam
177
bigWig
145
tsv
85
txt
51
bed narrowPeak
19
bigBed narrowPeak
11
fastq
7
bedpe bed3+
5
bed bed3+
5
hic
3
bed broadPeak
3
bigBed broadPeak
3
tagAlign
2
ibed
1
bed bedMethyl
1
bed bedgraph
1
bigBed bedMethyl
Organism
19
Homo sapiens
Biosample type
18
primary cell
1
tissue
Organ
10
connective tissue
8
musculature of body
5
epithelium
kidney
4
heart
1
limb
1
vasculature
Project
19
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
28
inconsistent control
19
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
1
smooth muscle cell of the brain vasculature
1
tissue
muscle of leg
1
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