Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
449
histone
449
histone modification
284
narrow histone mark
281
control
165
broad histone mark
56
transcription factor
14
RNA binding protein
5
nucleotide modification
1
recombinant protein
Date released
August, 2017
16
May, 2021
11
August, 2021
9
December, 2017
8
November, 2017
5
February, 2021
5
May, 2024
1
November, 2018
1
November, 2019
Available data
440
bigWig
436
bed narrowPeak
428
bam
407
fastq
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
9
tagAlign
3
tar
Organism
56
Homo sapiens
Biosample type
26
cell line
25
in vitro differentiated cells
5
tissue
Organ
20
liver
9
heart
kidney
4
artery
4
blood vessel
4
vasculature
3
embryo
2
epithelium
2
pancreas
Project
56
AMP
Genome assembly (visualization)
34
hg19
24
GRCh38
Lab
28
AMP-T2D consortium
12
Kyle Gaulton, UCSD
11
Bing Ren, UCSD
5
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
4
inconsistent control read length
organ_slims!
kidney
month_released!
August, 2017
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
56 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
20
smooth muscle cell of the coronary artery
4
EndoC_BH1
1
iPSC derived cell line
1
in vitro differentiated cells
embryonic stem cell
12
cardiomyocytes
3
pancreatic endoderm
3
Posterior foregut
2
definitive endodermal cell
2
+ See 2 more…
tissue
left cardiac atrium
5
See all biosamples
Download