Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
WGBS
17
RRBS
1
DNAme array
Assay category
1792
Transcription
1709
DNA binding
659
DNA accessibility
86
DNA methylation
33
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
23
July, 2019
15
August, 2017
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
25
bed bedMethyl
25
bigBed bedMethyl
14
fastq
11
bam
10
bigWig
6
tsv
Organism
86
Homo sapiens
Biosample type
55
primary cell
31
tissue
Organ
53
epithelium
49
pancreas
10
heart
7
connective tissue
6
adipose tissue
6
liver
6
musculature of body
kidney
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
47
HPAP
39
AMP
Genome assembly (visualization)
15
hg19
10
GRCh38
Lab
47
Klaus Kaestner, Upenn
39
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
month_released!
November, 2018
BIOSAMPLE
ASSAY
86 results
search-icon
table-tab-icon
Clear Filters
WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 5 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 10 more…
See all biosamples
Download