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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
130
DNase-seq
13
ATAC-seq
4
FAIRE-seq
Assay category
147
DNA accessibility
Date released
109
June, 2019
September, 2018
11
October, 2019
10
August, 2017
10
November, 2018
5
September, 2017
1
July, 2019
1
November, 2020
Available data
1682
bam
1647
bigWig
1550
tsv
460
fastq
334
bed narrowPeak
153
zippedFastqFolder
147
bigBed narrowPeak
142
bed bed3+
130
bed broadPeak
128
bigBed broadPeak
99
txt
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
3
cool
2
csv
2
ibed
1
bedpe
1
tar
1
vcf
Organism
147
Homo sapiens
Biosample type
115
tissue
28
primary cell
3
in vitro differentiated cells
1
cell line
Organ
kidney
36
limb
33
brain
33
musculature of body
30
heart
26
epithelium
18
pancreas
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
147
AMP
Genome assembly (visualization)
138
GRCh38
131
hg19
Lab
147
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
kidney
month_released!
September, 2018
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
147 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
muscle of leg
13
body of pancreas
4
+ See 33 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
1
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic acinar cell
2
+ See 13 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
See all biosamples
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