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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
DNase-seq
102
ChIP-seq
2
total RNA-seq
Assay category
109
DNA accessibility
102
DNA binding
2
Transcription
Target of assay
48
histone
48
histone modification
36
control
27
broad histone mark
21
narrow histone mark
18
transcription factor
14
RNA binding protein
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
284
October, 2019
205
February, 2023
200
May, 2022
189
August, 2021
168
July, 2018
137
June, 2019
115
May, 2019
97
July, 2019
94
December, 2017
88
November, 2018
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
57
April, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
213
bam
177
bigWig
175
bed narrowPeak
175
bigBed narrowPeak
109
bed bed3+
109
bed broadPeak
109
bigBed broadPeak
60
fastq
2
tsv
Organism
213
Homo sapiens
Biosample type
169
tissue
44
primary cell
Organ
kidney
57
pancreas
43
musculature of body
41
connective tissue
35
heart
32
limb
30
brain
24
adipose tissue
22
epithelium
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
Project
213
AMP
Genome assembly (visualization)
177
GRCh38
161
hg19
Lab
213
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
kidney
BIOSAMPLE
ASSAY
213 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
body of pancreas
2
33
heart
18
muscle of arm
17
endocrine pancreas
16
muscle of leg
13
+ See 27 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
+ See 10 more…
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